Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQYTFRIDNK--DPLYKKLIKLPTAYYRLKHDGNKHNIHSNNNVILEIGNNTNGVKLRWENDKIVLHKGSSALY-------
4LVN Chain:P ((13-93))
KLRLIVSENHATTPSFFQESLLEPDVLSFLESKGNLSNLKNINSMIIELKEDTTDDELI-SYIKILEEKGALIESDKLVSAD
General information:
TITO was launched using:
RESULT:
Template:
4LVN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2765 for 471 contacts (5.9/contact) +
2D Compatibility (PS) -7600 + (NN) -1400 + (LL) 156
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -9179.0 ( -19.49 by residue)
QMean score : 0.411
(partial model without unconserved sides chains):
PDB file :
Tito_4LVN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4LVN-query.scw
PDB file :
Tito_Scwrl_4LVN.pdb
: