Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLKAWLITTFLLLYPSATFCDDCNFNLPYRGLSCNLDLSHKNLSNIKKLLNNSDKFVALTFDDGPSSNRVNNIINILENYKAKATFFLLGERINKKTSEIVKKIYNAGHELGNHSWSHKKLTSLSSEKQLQELEKTNMVIKNAIERDVKWFRSPYGCHDDNLIKNTNQLNMCSILWTVDSLDWQGDKPEILVDRVVGNVHNGAIILFHDHDNKSNTVEALPQIIKILKKLGYEFVTLSEWEERVCKAKGVSMGEGVFKKILCG |
2C1I Chain:A ((231-422)) | --------------------------------------------------DKKHQKVVALTFNDGPNPATTPQVLETLAKYDIKATFFVLGKNVS-GNEDLVKRIKSEGHVVGNHSWSHPILSQLSLDEAKKQITDTEDVLTKVLGSSSKLMRPPYGAITDDIRN---SLDLSFIMWDVDSLDWKSKNEASILTEIQHQVANGSIVLMHDIH--SPTVNALPRVIEYLKNQGYTFVTIPEMLNTRLKAHELYYSRDE------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99905 for 1567 contacts (-63.8/contact) +
2D Compatibility (PS) -20560 + (NN) -8616 + (LL) 3072
1D Compatibility (HY) -16800 + (ID) 3700
Total energy: -146509.0 ( -93.50 by residue)
QMean score : 0.551
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