Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWIKNKVFNRRAFILGGIQLTISTIFSCRLYSLQIRNRQKYEKLADNNRIRVAAIMPKRGRILDRNGIELAVDKISYIVLFDKQKISSEEVDWETLSEIESNVTKSSETKITALYKRHYPFGSICSHTLGYTKKQQ----GINEAGISGIEYTYDHILKGKPGRSEQEINSKKRIVRELSSIPQQDGQDVQLTIDIDLQEKIAEIFK-------GHKGSVTAIDVGNGEILTLYNSPSYDNNLFANKLSNEAWEGLNTPSLPLVNRALSYQIPPGSIFKIIVALAGLKDGIITPEEKFSCVGYMKIGERRFCCLKS----KVHGYVSLNEAMALSCNTYFYNIGKKISVDSLVEMARKFGIGSGPLIGAFKEEAPGLLPDKDWRTRKLYSEWYLGDTVNLVIGQGYVLTTPLQLAVLAARIAT-GKEVIPRIEMSKTMQD------F-PD-I-DI-AHEHLSIVRKAMFNMVNIK-AGT------YRKG-LS-SIRIAGKTGTPEINSK---------GESHKLFIAYGPYHDPRYAISVFIEYGK--APRQDVAMANEILRYMLKG |
| 1QME Chain:A ((23-564)) | -----------------------------------------------------TVPAKRGTIYDRNGVPIAEDAT--------------------------------------SPNRSYPNGQFASSFIGLAQLHENEDGSKSLLGTSGMESSLNSILAGTDG-------------------RTMDGKDVYTTISSPLQSFMETQMDAFQEKVKGKYMTATLVSAKTGEILATTQRPTFDADTKEGITE----------DFVWRDILYQSNYEPGSTMKVMMLAAAIDNNTFPGGEVFNS-SELKIADATIRDWDVNEGLTGGRMMTFSQGFAHSSNVGMTLLEQKMGDATWLDYLNRFKFGVPTRF-GLTDEYAGQLPAD-----------NIVNIAQSSFGQG-ISVTQTQMIRAFTAIANDGVMLEPKFISAIYDPNDQTARKSQKEIVGNPVSKDAASLTRTNMVLVGTDPVYGTMYNHSTGKPTVTVPGQNVALKSGTAQIADEKNGGYLVGLTDYIFSAVSMSPAENPDFILYVTVQQPEHYSGIQLGEFANPILERASAM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QME.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -208094 for 3502 contacts (-59.4/contact) +
2D Compatibility (PS) -40588 + (NN) -13526 + (LL) 10712
1D Compatibility (HY) -3600 + (ID) 4300
Total energy: -259396.0 ( -74.07 by residue)
QMean score : 0.504
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