Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRGIGTDIVYIPRILRILQKYGKKFLNKIYTEQEIEISRKYNSQEMQAKYLAKRFAAKEAFVKALG-GFSHGIIMKDIEIYNDVRGKPHLTVSKNFIF-----KDHMIHLSLSDDGDCATAFVIICSSLP
3QMN Chain:A ((4-128))
MIVGLGTDIAEIERVEKALARSGENFARRILTDSELEQFHAS---KQQGRFLAKRFAAKEAASKALGTGIAQGVTFHDFTISHDKLGKPLLILSGQAAELASQLQVENIHLSISDERHYAMATVILER---
General information:
TITO was launched using:
RESULT:
Template:
3QMN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88098 for 893 contacts (-98.7/contact) +
2D Compatibility (PS) -13227 + (NN) -5445 + (LL) 20
1D Compatibility (HY) -3600 + (ID) 2550
Total energy: -112900.0 ( -126.43 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_3QMN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QMN-query.scw
PDB file :
Tito_Scwrl_3QMN.pdb
: