Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKIENPRENIAYELVNNGSKLTNENKQKILELAKKIKKEENIASILKKSGNNAKKILTITVSFNDQEEK
6PAX Chain:A ((14-54))
-----------------NGRPLPDSTRQRIVELAHSGARPCDISRILQVSNGCVSKILGRYYATGSIRPR
General information:
TITO was launched using:
RESULT:
Template:
6PAX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2624 for 247 contacts (10.6/contact) +
2D Compatibility (PS) -4348 + (NN) -2929 + (LL) 1420
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -7183.0 ( -29.08 by residue)
QMean score : 0.652
(partial model without unconserved sides chains):
PDB file :
Tito_6PAX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-6PAX-query.scw
PDB file :
Tito_Scwrl_6PAX.pdb
: