Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLFDCLIIFIIVVCIIISITRGFIKELCALMFLFLSAFLTANHYDFFTINYSKYFNSKAMQNIFSTISVFIIFNLIFMIVNNWLMYILTPIRLGLIDRVTGTFVGALRGVLLSYVLFFAMHLYCYTVHDKKEEQSKIEAEDILPNWIINSYSYQALFATVEDIVDVYVPESLILKIKEIGEGMANQEKLKGDKKEE |
| 2J5D Chain:A ((146-190)) | ---------------------------------------------------------------------------------------------------------------------------------------------------RNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIYIGRRLTTS---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J5D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1175 for 164 contacts (-7.2/contact) +
2D Compatibility (PS) -4690 + (NN) -636 + (LL) 14976
1D Compatibility (HY) -2400 + (ID) 400
Total energy: 5675.0 ( 34.60 by residue)
QMean score : 0.097
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