Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSVAYFIYSEYSVEFTKKISKNDPFSRALKNRNKLFKRFFMIR
3F4L Chain:A ((60-109))
-----------VLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTLAQAKELFALAKSKG
General information:
TITO was launched using:
RESULT:
Template:
3F4L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13201 for 296 contacts (-44.6/contact) +
2D Compatibility (PS) -4964 + (NN) 339 + (LL) 540
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -20386.0 ( -68.87 by residue)
QMean score : 0.112
(partial model without unconserved sides chains):
PDB file :
Tito_3F4L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F4L-query.scw
PDB file :
Tito_Scwrl_3F4L.pdb
: