Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHLIVGLGNPGSQYELTYHNIGFIIVDAICKHWNFQSFS--KKADCLITSSVINDNKIMLMKPYSFMNNSGIPVARIRNFYKFSLDNVIVIHDDADLEPGRIKIKKGGGSAGHNGLKSIDSSIGN-DYWRLRFGIGRSDSQRSLADYVLSKFSNLDDV-IPL-VERIAQNIHLMLQGNNIAFTNSIV
4QT4 Chain:A ((4-183))
--MIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDV-TFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFEKTMQKF
General information:
TITO was launched using:
RESULT:
Template:
4QT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126435 for 1371 contacts (-92.2/contact) +
2D Compatibility (PS) -18852 + (NN) -4751 + (LL) 372
1D Compatibility (HY) -19200 + (ID) 3500
Total energy: -172366.0 ( -125.72 by residue)
QMean score : 0.564
(partial model without unconserved sides chains):
PDB file :
Tito_4QT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QT4-query.scw
PDB file :
Tito_Scwrl_4QT4.pdb
: