Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIISDKVRQILSYYESENPGVRANLTRILMHGKLGGTGKLVILPVDQGFEHGPIKSFEVNPHAYDPHYHFQLAIDSGVSAYAAPLGMIEAGASTYAGMLPHILKLNSSNSLHSKSLTSDQAVTASVKDALRLGCTAVGFTIYPGSAKCFDMIEEARKIIAEAKSYGLAVVLWSYPRGEGISKEGETAVDVIAYAAHIAALLGANIIKVKLPTNHLEKEKIEAGNIKSLSKRIEYVKKSCFAGKRIVVFSGG-ESKSVNDIYNEAKEIKQGGGNGSIIGRNTFQRKKEEALSMLKDIMDIYT |
1OK4 Chain:J ((3-250)) | -----------------------NLTEKFLR-IFARRGKSIILAYDHGIEHGP-ADFMDNPDSADPEYILRLARDAGFDGVVFQRGIAE---KYYDGSVPLILKLNGKTTLYNGEPVS--VANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVN--ETAPEIVAYAARIALELGADAMKIKY-----------TGDPKTFSWAVK------VAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRR--DALKFARALAELVY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1OK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -159342 for 2207 contacts (-72.2/contact) +
2D Compatibility (PS) -27825 + (NN) -17499 + (LL) 3176
1D Compatibility (HY) -16800 + (ID) 4850
Total energy: -223140.0 ( -101.11 by residue)
QMean score : 0.552
|
|
|