Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIISDKVRQILSYYESENPGVRANLTRILMHGKLGGTGKLVILPVDQGFEHGPIKSFEVNPHAYDPHYHFQLAIDSGVSAYAAPLGMIEAGASTYAGMLPHILKLNSSNSLHSKSLTSDQAVTASVKDALRLGCTAVGFTIYPGSAKCFDMIEEARKIIAEAKSYGLAVVLWSYPRGEGISKEGETAVDVIAYAAHIAALLGANIIKVKLPTNHLEKEKIEAGNIKSLSKRIEYVKKSCFAGKRIVVFSGG-ESKSVNDIYNEAKEIKQGGGNGSIIGRNTFQRKKEEALSMLKDIMDIYT
1OK4 Chain:J ((3-250))-----------------------NLTEKFLR-IFARRGKSIILAYDHGIEHGP-ADFMDNPDSADPEYILRLARDAGFDGVVFQRGIAE---KYYDGSVPLILKLNGKTTLYNGEPVS--VANCSVEEAVSLGASAVGYTIYPGSGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVN--ETAPEIVAYAARIALELGADAMKIKY-----------TGDPKTFSWAVK------VAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRNVWQRR--DALKFARALAELVY


General information:
TITO was launched using:
RESULT:

Template: 1OK4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -159342 for 2207 contacts (-72.2/contact) +
2D Compatibility (PS) -27825 + (NN) -17499 + (LL) 3176
1D Compatibility (HY) -16800 + (ID) 4850
Total energy: -223140.0 ( -101.11 by residue)
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_1OK4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OK4-query.scw
PDB file : Tito_Scwrl_1OK4.pdb: