Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEVVTFGCRLNFYESELIKEALRKAERE--------NVVVVHSCAVTNEAERQVKQKIRKI--YKNDPNKEIIVVGCAVQ-LDPESYSNIPGVSKVLGNQDKLKTENYLLSNNKILVNDNQASKSEPALIDKFKDKSRAFIEVQNGCDHSCTFCSITEARGNNRSVPINNIIEQIKIFVANGYQEVVFTGVDITDFGTDLFGKPSLGLMVRRVLKDVPELKRLRLSSIDVAEVDDELMDLIVNESRFMPHLHLSLQSGNNLILKRMKRRHSREQVIEFCHKVKSLRSNIAYGADIIAGFPTETDEMFQDTVNLLEETNTVYLHAFPYSKRKNTPAARMP-QVPENVRKERVKNLRKINKAMMSNFYQSLIGTKQSVLVEQNN----IGRA-----ENFALVKFTSKIQAKSIVKATIIGMESGYLVGSIIP-- |
| 4JC0 Chain:A ((2-433)) | RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRYYEELKKEIPEVDQWIGVADPEEIANAI---------ETDLVPDRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNS-LNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGSVILEH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161929 for 3233 contacts (-50.1/contact) +
2D Compatibility (PS) -43686 + (NN) -22021 + (LL) 468
1D Compatibility (HY) -25200 + (ID) 5050
Total energy: -257418.0 ( -79.62 by residue)
QMean score : 0.519
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