Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPARSAEDVITSLIEFVNKRKVTITREEMLKIAQLVRIKLSNDEIEHYSKEL-TMLDWI--HDILLRVNTKDVSPIRYGSIDKDIHVRDDVVNFQSMKEEILSNTK-SEHGYFVVPKVIND
2G5H Chain:C ((4-97))
-----------------------VTREEVEHIANLARLQISPEETEEMANTLESILDFAKQND---SADTEGVEPT-YHVLDLQNVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNE
General information:
TITO was launched using:
RESULT:
Template:
2G5H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -15339 for 353 contacts (-43.5/contact) +
2D Compatibility (PS) -9732 + (NN) -3193 + (LL) 2732
1D Compatibility (HY) -2400 + (ID) 1600
Total energy: -29532.0 ( -83.66 by residue)
QMean score : 0.414
(partial model without unconserved sides chains):
PDB file :
Tito_2G5H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2G5H-query.scw
PDB file :
Tito_Scwrl_2G5H.pdb
: