Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDKKDNAKANSGKIMYPNFFEIDFIINEKEIDCNVTRMLIEKAKKGHKFGETWEDYYRSISDNKRISIYKNV
2FJ6 Chain:A ((57-73))
----------------------------------------------MATFDEAWDQYESEVHGRLEHHHHHH-
General information:
TITO was launched using:
RESULT:
Template:
2FJ6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -972 for 64 contacts (-15.2/contact) +
2D Compatibility (PS) -1805 + (NN) 409 + (LL) 3200
1D Compatibility (HY) -1200 + (ID) 200
Total energy: -568.0 ( -8.88 by residue)
QMean score : 0.272
(partial model without unconserved sides chains):
PDB file :
Tito_2FJ6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FJ6-query.scw
PDB file :
Tito_Scwrl_2FJ6.pdb
: