Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAHIPVLLKEMLLQLSPQNGGIYVDATFGAGGYSKAILESAD-CKVYAIDRDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGER-HSRRIARAIVNARKKKTIKTTFELANIVRSVVFRG---KSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
1M6Y Chain:A ((8-296)) | QRHIPVMVREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLG-------------------------------------IEKVDGILMDLGVSTYQLKGENRGFTFEREEPLDMRMDLESEVTAQKVLNELPEEELARIIFEYGEEKRFARRIARKIVENR---PLNTTLDLVKAVREALPSYEIRRRKRHFATKTFQAIRIYVNRELENLKEFLKKAEDLLNPGGRIVVISFHSLEDRIVKETFRNSK--------KLRILTEKPVRPSEEEIRENPRARSGRLRAAERI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1M6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140736 for 2448 contacts (-57.5/contact) +
2D Compatibility (PS) -30643 + (NN) -10271 + (LL) 2776
1D Compatibility (HY) -24800 + (ID) 6000
Total energy: -209674.0 ( -85.65 by residue)
QMean score : 0.536
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