Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSILAIDTVGTGGSSIAIIDHDGNCFVEHNS-ISNSHAESFFQILNTLFNKHNYNYSKLDHLAVVVGPGSFNGIRVGISAAKGINLVTNKPLYGVNALEVQAYAMSLLCANNKKNIRAMIKS-SQGFYMQLFDCNLL----PLSDPTTT--HDAQCL-G--TRTSGNNYITYMDCNLP------------------KLDASHAGLLVHYR--LKNKQKLNEVEALYLNELQYMKLL
3ZEU Chain:A ((2-226))
-RILAIDTATEA-CSVALWNNG-TINAH-FELCPREHTQRILPMVQEILAASGASLNEIDALAFGRGPGSFTGVRIGIGIAQGLALGANLPMIGVSTLATMAQGAWRKT--GATRVLAAIDARMGEVYWAEYQRDAQGVWQGEETEAVLKPERVGERLKQLSGEW----ATVGTGWSAWPDLAKECGLTLHDGEVSLPAAEDMLPIASQKLAAGETVAVEHAEPVYLRNEVAWKKL
General information:
TITO was launched using:
RESULT:
Template:
3ZEU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122142 for 1641 contacts (-74.4/contact) +
2D Compatibility (PS) -20592 + (NN) -4960 + (LL) -268
1D Compatibility (HY) -2800 + (ID) 1950
Total energy: -152712.0 ( -93.06 by residue)
QMean score : 0.398
(partial model without unconserved sides chains):
PDB file :
Tito_3ZEU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZEU-query.scw
PDB file :
Tito_Scwrl_3ZEU.pdb
: