Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSAVIVKPKRNVFAVLDIGTTKIICLIVKVSGNFNYKITGTGYKIAEGINGGLITDIKYASYSISSTIGLAEQVSEETIDQIYVNIAG--CGILSFNVHNEIIAA---NHEISDRDIKRVIFQTFEK-YIEENVIIHNIPLRYHLDDMTDIREVSGLYGK-RLSADVNVVTASRPALTNIENCITNNSGISMAGCIASAYSAGFACLSEDEKELGTAIVDIGGGCTAIGIFKRSKLIYANSIPIGGVHITRDIAYGLCTSIEHAERIKILYGSTVVTSIDENEYITVQSNENDEQARIPKSELVDIIRPRIEEILELVKEQFRK--QKDPINKVVITGGTSRLASMKEIASYIFNKQVRIGCPESYGGLDGEYNKNPVFSAAIGSIKLIVDTFYKNNPDMLGQDGKISKLYHWVKSKVTV |
| 3WT0 Chain:A ((20-391)) | ---------EEHYYVSIDIGSSSVKTIVGEKFH-NGINVIGTGQTYTSGIKNGLIDDFDIARQAIKDTIKKASIASGVDIKEVFLKLPIIGTEVYDES----NEIDFYEDTEINGSHIEKVLEGIREKNDVQETEVINVFPIRFIVDKENEVSDPKELIARHSLKVEAGVIAIQKSILINMIKCVE-ACGVDVLDVYSDAYNYGSILTA-TEKELGACVIDIGEDVTQVAFYERGELVDADSIEMAGRDITDDIAQGLNTSYETAEKVKHQYGHAFYDSASDQDIFTVEQVDSDETVQYTQKDLSDFIEARVEEIFFEVFDVLQDLGLTKVNGGFIVTGGSANLLGVKELLSDMVSEKVRIHTPSQ------MGIRKPEFSSAISTISSSIAFDELLD----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WT0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259553 for 3141 contacts (-82.6/contact) +
2D Compatibility (PS) -39135 + (NN) -7845 + (LL) 1672
1D Compatibility (HY) -22800 + (ID) 5000
Total energy: -332661.0 ( -105.91 by residue)
QMean score : 0.482
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