Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKRIINNVFAREILDSRGYPTVEVEIELCDGATGRASVPSGASTGKLEALELRDQDEKRYCGKGVLKAVKAVNGVIANAIIGMDAADQSTIDKALIELDGTRNKSKLGANATLGVSLASAKAAANSFKMPLYRYLGGEQANVMPFPLINIINGGVHADNKLDFQEFMILPIGAEAFSEAIRMSAEVFHNLRSILRKRGYSTNVGDEGGFAPNIESTEEALDLIVHAIESASYSTQNHFALGLDVASSTFYKNKIY--KFANKELTSEELVEYYYNLVEKYPITSMEDAMSEDDYEGWKLLTAKLGSKVQLVGDDLFVTNCELIRKGIEEKMANAVLIKPNQIGTLTETFTAIGMTKSGGYKAVISHRSGETEDTTISHIAIASNCGQIKTGSLSRSDRLAKYNELIRIEGTLERNAKYYYGLAWTS
4YWS Chain:B ((4-418))----LIEAIVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSG----------LRDGDKSRYNGKGVLKAVQAVNEDIAEALIGFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAAAAFGLPLYRYLGGVYAHVLPVPMMNIMNGGQHAT---DFQEFMIMPVGAESFREGLRWGAEIYHMLKKVIHDR--------EGGFAPSL-TNDAPLQLIMEAIEKAGYRPGEQIVIALDPATTEIF----YHLK-EGR--SSAEMVDYWVDLVNRYPIISLEDGLAEDDWEGWALL-AKLGDRVQLVGDDFLVTNVQRLQRAIEAKAANSILIKLNQIGSLTETLSAIQLAQRSGWTAVVSHRSG-SEDVTIADLVVATNAGQIKTGAPA-TDRIAKYNQLLRIEEELGSAARYAGRSAFKV


General information:
TITO was launched using:
RESULT:

Template: 4YWS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -206555 for 3356 contacts (-61.5/contact) +
2D Compatibility (PS) -41046 + (NN) -15941 + (LL) 2180
1D Compatibility (HY) -42800 + (ID) 10950
Total energy: -315112.0 ( -93.90 by residue)
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_4YWS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YWS-query.scw
PDB file : Tito_Scwrl_4YWS.pdb: