Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDFIDEVKLYLKAGDGGDGCVSFRREKFVEFGGPNGGNGGKGGNIVFVSDANLNTLLNFRYRRHVKAGSGKSGASRDRSGTAGKNIVLKVPVGTQIIDEESEKIILDFNKPDMEFLIAQGGKGGLGNTNFKSSINRAPRHFTCGQFGEEKYVVLKLKVLSDVGIIGMPNAGKSKFLTRCSNADTKVGDYPFTTIKPHLGVAKV-DNSEVVIVDIPGIITDAHLGIGLGHKFLKHVERCKILLHLIDVTHDNVVSAYNCMRNELELYNSDLVKKEEIIVLNKCDLLRKVEIFEKKNHLANYLNKEVLCLSI--GEDLQPILRLLNEKLKKGSSKKVDVYDPFKR-------------------------------------------------------------------------
1UDX Chain:A ((1-416))M-FQDVLVITVAAGRGGDGAVSFRREKFVPKGGPDGGDGGRGGSVYLRARGSVDSLSRLS-KRTYKAEDGEHGRGSQQHGRGGEDLVIEVPRGTRVFDADTGELLADLTEEGQTVLVARGGAGGRGNMHFVSPTRQAPRFAEAGEEGEKRRLRLELMLIADVGLVGYPNAGKSSLLAAMTRAHPKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGASEGKGLGLEFLRHIARTRVLLYVLDAA-DEPLKTLETLRKEVGAYDPALLRRPSLVALNKVDLLEEEAVKALADALARE-GLAVLPVSALTGAGLPALKEALHALVRSTPPPEMPKPVPQAGVEVVPVAEGVYEVRAPEVERYLARIKGDLMEAAGYLQEVFRRQGVEAALRAKGVRAGDLVRIGGLEFEYIPEV


General information:
TITO was launched using:
RESULT:

Template: 1UDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -122238 for 2762 contacts (-44.3/contact) +
2D Compatibility (PS) -35338 + (NN) -7957 + (LL) 236
1D Compatibility (HY) -19600 + (ID) 6050
Total energy: -190947.0 ( -69.13 by residue)
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_1UDX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UDX-query.scw
PDB file : Tito_Scwrl_1UDX.pdb: