Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKLSIYVTLSISLVLILLQVTVTFKDWDSYKEYIVQGLEKTYNAKVHIGGKVEVSLITPKLTVHNVYMQCNNNKEQKLSTLIGVNKIEVRPSILSLFLFSLQPKSITLLGMKSNRENFINIINAKTSSNAVDIVIKGSQVSLNNNFTDYDNIVNIEKVAIGKSKQFSGEIRVDSNDYDFSGKVNITKKNVHISVESNFINLLFTGKKNQAGLQGKLTLTINNSSDFINDLAKITNLSFLAYVIPGENIEISSNIDFNGNDFTATDLKIKSKSMQASGIIQNDRKSNHTNINISFSKVNLDSIRNSSRRIIDIKDLLECFRKVVPRNLSLDFNIEASNIQYQNKILDKSHAILKFADGEIKVDMLLKFPGTNNVSHLSGKVSNSGTLSEFNGNLLVKGDNFKSFISCFFPSIKIKGNQKNQFTLSSELHFAPRILSISNIRFLNDK-EFLQGSIKVSHTKKHNVVGGRFSVHNLDADKYDYSLFSSLSKMGWLKNLRYDVSIKINANDFKLNDTKIKDLDFLLKMEKGKLVVDKINLSGEDCDINGSTKILVDQRYTKPLLEVNLTGNKFNGDIFKLPSFIEVKRDSRNKINQIQWSTKQFDFLDNKESFDANVQINAIEFRVGQNVLKDFNLDAVVRNNTVTMRQVSYALEHGQVFFQGYLRSDSMYTKFLITNLDAKGIGKAIGIDNVDGRISLNGEIKAQGKSFHGWANNLSGEINLQAQEIEFTNVDFNSFITNLLNGKNKSEISTLAHDDIYNGSTLFENVIGKANIKNGVCSTSLQFRIDQASGSISSNLTLPNFALISLVRFFFILPGHSSPIYIDMHLDGPIWHPKMNFDVDQIFSTLKRIRSIKFIFAK
1LC3 Chain:A ((117-183))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RVLHEEHVELLMEEFEFLRREVLGKELLKGSL---RFTASPLEEERFGFPAFSGISRLTWLVSLFGELSLISATLEERKEDQYMKMTVQLETQNKGLLSWIEEKGPGLKRNRYVNFQFTSGSLEEVPSVGVNKNIFLKDQDIFVQKLLDQVSAEDLAAEKKRIMHCLGLASDIQKLCHQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1LC3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -4399 for 288 contacts (-15.3/contact) +
2D Compatibility (PS) -6712 + (NN) -1209 + (LL) 40804
1D Compatibility (HY) -6400 + (ID) 850
Total energy: 21234.0 ( 73.73 by residue)
QMean score : 0.094

(partial model without unconserved sides chains):
PDB file : Tito_1LC3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LC3-query.scw
PDB file : Tito_Scwrl_1LC3.pdb: