Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSDLKTMMLNFGPQHPAAHGVLRLVLEMDGEIIERADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNISSQAL-DVGAMT---------------------------------------------------------------------PLLWLFEEREKILEFYERASGARFHAAYIRPGGVAADVP--------EGLIEDIAKFIEQFPQYIDDV------------DEL---------LTENRIWK--------QRTVGISEISIKQ------------------AL------------------------------------------D------------WGFSGPMLRAAGLAWDLRKSQPY--EIYDQLD--FDIPVGQNGDCYDRYLVRMEEIRQSVSLVKQCIEKIPEG----PVKTEDRKISPPPRTEMKRSMEALIHHFKLYSEGYHVPEGEAYAAVEAPKGEFGVYIVSDGTNRPYRCRIRAPGFAHLQALDF---------MAKGH-MLA------DVAAIIGSLDIVFGEIDR |
3MYR Chain:B ((4-560)) | -------RIVVDPITR-IEGHLRIEAQMDGATIAQA-YSSGTMVRGIETILKGRDPRDAWAFVQRICGVCTLVHGIASVRAVEDALRIELPLNAQLIRNLMIGAQYIHDHVMHFYHLHALDWVDVVSALSADPRATSELAQSISAWPKSSPGYFADTQKRIKTFVESGQLGIFANGYWGHPAYRLPPEANLMAVAHYLEALAWQRDTAKFHAIFGGKNPHPN-FVVGGVPSPIDLDSDSALNAKRLAEVRNLIQSMRTFVDQVYVPDTLAIAGFYKDWGERGEGLGNFLCYGDLPTGASLDPATFLFPRGAILDRDLSTIHEVDLEATGEIQEFVNHSWYEYSVGNDRGLHPYEGQTNLEYDRRGGVAPPYKQLDVSDGYSWLKAPRWKGRSVEVGPLARVLMLY-ATG--HDQARELVDSTLSRLDLPVDALYSTLGRTAARALESKILVDAMQGWYDGLIANVKSGDTKTFNETLW--------------------E-PSSWPSRAQGVGIMEAPRGALGHWIVIE-DGRIANYQAVVPSTWNAGPRDGRGQAGAYEAALQDNHQLVDVKQPIEILRTIHSFDPCIACAVH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163879 for 2916 contacts (-56.2/contact) +
2D Compatibility (PS) -36748 + (NN) -7604 + (LL) 2232
1D Compatibility (HY) -8000 + (ID) 3400
Total energy: -217399.0 ( -74.55 by residue)
QMean score : 0.374
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