Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKISKLILSALKANKYTKVIVLFSSIFVILFSVIYCNYSLRDNFLSSYRDSSVSLKSVLENSIIKKYHYLLIEKHHIKYKSFDYINQLVKLRAELLQSVGEVKDLGLILYDQNSRIIFSHFNTQDHDYEQLLTNDEIDKLLNNQEIFYTIGHTLISIFPIFHENDTKPSFFLKIIQNHDNFYVMVYSLFLTFLGLLLIILILVMLYLHFSNTQMLVKQHKTNIELQQMKEALEQENTNKLKFFASVTHELRTPLNAIIGFAELIKNETLGSMDNYQYKEYVDDIYNAGT-HLLALINDVLDFSKAESSSLTVEKVKFNLNKIIDSCLNMLSPKLKETG-----ISLEKEIPNRQLLVIADPKRMKQVIINLLSNSIKFTPKDGLIRMVIKENIEKNLLTIEFHDNGIGIMQQDIYKVMSVFGQADSGYRNE--GTGIGLPLSKKLVELMGGTFNIKSEAKLGTTITLNFFYEEQTCEDLIDF |
| 4U7O Chain:A ((25-263)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTEQQKIDNDRK-QFVSNVSHELRTPLTSLRSYIEALSD---GAWKDPEVAPGFLKVTQEETDRMIRMINELLSLSRMDSGTTRVDMELVNINEMFNYVLDRFDMILKKDDNPAKYYTIKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPDGGVVTCRLLET--HNQVIISISDQGLGIPRADLGHVFDRFFRVDK-----QGGTGLGLAISKEVVQMLGGRIWVDSVEGKGSTFYISLPYE---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4U7O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -109751 for 1558 contacts (-70.4/contact) +
2D Compatibility (PS) -24245 + (NN) -4732 + (LL) 21728
1D Compatibility (HY) -20000 + (ID) 3250
Total energy: -140250.0 ( -90.02 by residue)
QMean score : 0.482
|
|
|