Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNSVIEITSIKRRFCAYLIDMAVLLIPNLLIIILLKNFP--LILD----LLYMCVNCSYF-----TYFISSAAQATPGQQLMNIHTISLDGSKINLSLAFDRSISQFFLHLLNNVIAILIELFQEQNELVSALIILGVIMLLLTICWYLVACFSQEKQTYHDMLFDTIVVKGAIK--
2OST Chain:A ((1-148))
MGS----TKLKGDIAQQAAIMRALKMGWGVLKPLGDRLSYDLVFDVEGILLKVQVKSSWKSEKTGNYVVDNRRTRTNRR---NIVRSPYRGNDFDFAVAYVEELELFYVFPVDVFISYGSEIHLVETDKRQ----------------------RKPRSFGYREAWHLILQKGAAQKE
General information:
TITO was launched using:
RESULT:
Template:
2OST.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101082 for 879 contacts (-115.0/contact) +
2D Compatibility (PS) -14161 + (NN) -837 + (LL) 4332
1D Compatibility (HY) -5200 + (ID) 1300
Total energy: -118248.0 ( -134.53 by residue)
QMean score : 0.111
(partial model without unconserved sides chains):
PDB file :
Tito_2OST.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2OST-query.scw
PDB file :
Tito_Scwrl_2OST.pdb
: