Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELESLFQDIMDGF--AVYNNKVAVAVSGGIDSIVLLHLITSWAEKRQCPPPIALAVNHGLRP-ESQEEVEFVVSYAKELGVKKSFILNWKRQ----NIKGNVQSQARKARYELLTEWCKNNDVKHLFIAHHKDDQAETFLLRLERGSGLDGLSSMDYKSSLNGVCMLRPLLSFSRSRIKKYADFYRLKWVEDRSNQSLKYKRTLYRNLLKASGNQ--EILTERICLTTLHIKRATKALMHYTRLAFNDCVNVHDLGYIEIKLSEFYKLPEEIALRLLLYSIMVISSK-HYKPRYNSLIAIFNKVLQKDNDVHCTL-SGCKIRKYGESILIIRESSKIQ---------EISVSLPLNAPIE---W--------DNR-----------FSCTILGNQECSVTIAPLK--KTQKIPKFLKDYDCCPEVFYSLPVVLKD-GKVLAYLHLNHDRKNINGDEVQCIINSTIKQNLVILAGI |
| 3A2K Chain:A ((2-449)) | ---IDKVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEW-KLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRIL-CETAQIDVPAFQRSAGLGAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVKRPFHGGYLIRPFLAVSRAEIEAYCRQMGLSPRCDPSNEKDDYTRNRFRHHIVPLLRQENPRLHERFQQYSEMMAEDEQFLEELAADALNKVMEKQ-HRDAALSIGPFLELPRPLQRRVLQLLLLRLYGGVPPTLTSVHIGHILMLCERGRPSGMIDLPKGLKVIRSYDRCLFTFDAESGEKGYWFELPVPALLPL-PNGYAIISEFGEHYPRKQAGNDWFVVDPASVSLPLRVRTRRR-GDRMVLKGTGGTKKLKEIFIEAKIPRMERDRWPIVEDADGRILWVPGLKKSAFEAQNRGQARYILLQYQAM------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3A2K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199785 for 2909 contacts (-68.7/contact) +
2D Compatibility (PS) -43858 + (NN) -12088 + (LL) 1312
1D Compatibility (HY) -15200 + (ID) 4350
Total energy: -273969.0 ( -94.18 by residue)
QMean score : 0.510
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