Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSYKFLKEVLHRLKNIENTLKVLDQSQL----NVEDKVEQMGLLEEIRHEIISHNIIKESLAEA-GTP--SNKKKGDSWQLKLIERMHKSNSAIPIDLVKSLSKVKIECQNLRRLSQSEPSS-----LEKLKERFA---DLVKLIRGVVSIKSQQLKCSKYDSLLADYDSDITEKDVKEIFPKLGKFFSDNIDRIIEKQKKDKIT---NTQKIATQKQ--IELGSLC-----LQQIGVTSHH-TFYHHPID------YDESDFCYGLFLLLRYSGHEIYQRCLAQNSISSSFTRYI---MCETQGLFMERMIGTSREFIEFIQPYIKEKLTIKGKVNAKINSVENLYLIFNKVNLSSPLKKADEFSLLANIMLRTKLEQDIINGTLEVKDLHDAWLEGMEHYKIPVKAKNELDTYFQDEYWVSGTMGYFPIKIIALIIAVQIFSFIKKNHYEFLGAIIKGDFGLLIGWLSQNVCSAKCGFLD--LLKKVTGKGLDVECCSSYLSEKYDLSQ |
| 3HOA Chain:A ((24-505)) | ------------------GALAAWDQRTMIPKKGHEHRARQMAALARLLHQRMTDPRIGEWLEKVEGSPLVQDPLSDAAVNVREWRQAYERARAIPERLAVELAQAESEAESF--WEEARPRDDWRGFLPYLKRVYALTKEKAEVLFALPPAPGDPPYGELYDALLDGYEPGMRARELLPLFAELKEGLKGLLDRILGSGKRPDTSILHRPYPVEAQRRFALELLSACGYDLEAGRLDPTAHPFEIAIGPGDVRITTRYYEDFFNAGIFGTLHEMGHALYEQGLPKEHWGTPRGDAVSLGVHESQSRTWENLVGRSLGFWERFFPRAREVFASLGDV-----SLEDFHFAVNAVEPSLIRVEADEVTYNLHILVRLELELALFRGELSPEDLPEAWAEKYRDH-LGVAPKDYKDGVMQDVHWAGGLFGYFPTYTLGNLYAAQFFQKAEAELGPLEPRFARGEFQPFLDWTRARIHAEGSRFRPRVLVERVTGEAPSARPFLAYLEKKYAALY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HOA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -197452 for 3396 contacts (-58.1/contact) +
2D Compatibility (PS) -47502 + (NN) -18523 + (LL) 2372
1D Compatibility (HY) -14800 + (ID) 5500
Total energy: -281405.0 ( -82.86 by residue)
QMean score : 0.469
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