Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENLAYKLIKVTEAAALAAYKLVGLGDEKKADQVAVDAMRTVLNSMEINGTIVIGEGERDKAPMLYVGEKVGTG-N-----------GPEIDIAVDPLEGTTICAHYKQSAMSVLAAAKKGDFLHAPDIYMEKIAIGKDLPIGVVSLKNSVEKNFDNLAQAKKCEVNDLTVTILKRERHNNLILKIRKLGARVKLIDDGDIAAIVS--LINGSHDIYIGIGGAPEGVLAAAALSSIGGQMEGRLIFDTH------------QSKERAKILNIDDLEKIYSIKDMVKGES-VFIATGVTSGELVDGVKFGYNICSTSSLIMLHNK--VIKLQTIQNLC |
| 3ROJ Chain:A ((36-370)) | DSTLGLEIIEVVEQAAIASAKWMGKGEKNTADQVAVEAMRERMNKIHMRGRIVIGEGERDDAPMLYIGEEVGICTREDAKSFCNPDELVEIDIAVDPCEGTNLVAYGQNGSMAVLAISEKGGLFAAPDFYMKKLAAPPAAK-GHVDIDKSATENLKILSDCLNRSIEELVVVVMDRPRHKELIQEIRNAGARVRLISDGDVSAAISCAFSGTNIHALMGIGAAPEGVISAAAMRCLGGHFQGQLIYDPEVVKTGLIGESREGNLERLASMGIKNPDQVYNCEELACGETVLFAACGITPGTLMEGVRFFHGGVRTQSLVISSQSSTARFVDTVHMKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ROJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -215438 for 2775 contacts (-77.6/contact) +
2D Compatibility (PS) -33904 + (NN) -15565 + (LL) 204
1D Compatibility (HY) -24000 + (ID) 6250
Total energy: -294953.0 ( -106.29 by residue)
QMean score : 0.615
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