Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKFYNERSNSKNPSI----LLKEIVVKELANARVKIFLEKVREINLLPNNVPSSSMSHTSIFVLSPSNIRVVGHG
4O89 Chain:A ((31-86))
--RIVNIRANRPNPGLRPQHLHAILALKHLANAEVKGAHVGSRELVFIPKKLEAKEISIDIGTAGSITLVLQALLP
General information:
TITO was launched using:
RESULT:
Template:
4O89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6206 for 275 contacts (-22.6/contact) +
2D Compatibility (PS) -5391 + (NN) -902 + (LL) 128
1D Compatibility (HY) -2800 + (ID) 850
Total energy: -16021.0 ( -58.26 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_4O89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4O89-query.scw
PDB file :
Tito_Scwrl_4O89.pdb
: