Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--MNYLICLKNL----IREV-IEGKVKEVVIDKGNKYYQVSKNTDKELLDGIMCKSKLKTKLLHSVK
4V0B Chain:A ((8-70))
RKVDYSTFLQEVNNDQVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTK---NVKVVGEP-
General information:
TITO was launched using:
RESULT:
Template:
4V0B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14503 for 332 contacts (-43.7/contact) +
2D Compatibility (PS) -6161 + (NN) -1240 + (LL) 276
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -25178.0 ( -75.84 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_4V0B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4V0B-query.scw
PDB file :
Tito_Scwrl_4V0B.pdb
: