Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEACKTCEESQRELERELENLESQLSAVEKEKEDLENESAELQKQVQTLKEDKKMCKKD
3OJA Chain:B ((515-553))
--------KERQAFKLRETQARRTEADAKQKETEDLEQENIALEKQLDNKRAKQAELRQE
General information:
TITO was launched using:
RESULT:
Template:
3OJA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7649 for 146 contacts (52.4/contact) +
2D Compatibility (PS) -4617 + (NN) -4297 + (LL) 788
1D Compatibility (HY) 800 + (ID) 750
Total energy: -427.0 ( -2.92 by residue)
QMean score : 0.869
(partial model without unconserved sides chains):
PDB file :
Tito_3OJA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OJA-query.scw
PDB file :
Tito_Scwrl_3OJA.pdb
: