Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------MLDYLRISIGSLNEKNFHVIYTNKKYHLIAEDLQNISTIDQTSLYVKDIIKRVLLIGSTSIVISHNHSSGNTQPSSRIYPSLGS--------------------------------
2QLC Chain:A ((1-126))
MNLKVKGARDVFEYMKGRIPDETKEHLFVLFLSTKNQILRHETITIGTLTASLIHPREIFKAAIRESAHSIILVHNHPSGDVQPSNADKQVTSILKKAGDLLQIELLDHVIVGNNDWFSFRDHALL
General information:
TITO was launched using:
RESULT:
Template:
2QLC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12436 for 519 contacts (-24.0/contact) +
2D Compatibility (PS) -8734 + (NN) -1179 + (LL) 0
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -26449.0 ( -50.96 by residue)
QMean score : 0.358
(partial model without unconserved sides chains):
PDB file :
Tito_2QLC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QLC-query.scw
PDB file :
Tito_Scwrl_2QLC.pdb
: