Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNTHASVKNLSLWYGSKQALFDINLDICKKKVTAFIGPSGCGKSTFLRCFNRMNDYVPGCKVAGKLDIDGLGDIYSRNVDVVLLRAKVGMVFQKPNPFPK-SIYDNVAYGP-KLHGMVKNKQKLDEIVENSLTKVGLWEELKDRLQDSALDLSGGQQQRLCISRAIAVKPTILLMDEPCSALDPMATNAIENLIQELKLR-FTIIMVTHSMKQAKKLSDSIIFFCNGKIVESGSVQEIFENARSPLTKEYILDH
4YMU Chain:A ((11-236))--------------FGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEE-----PTKGEVFIDGV-KINNGKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKM--NKKEAEELAVDLLAKVGLL----DKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLSKI


General information:
TITO was launched using:
RESULT:

Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140529 for 1758 contacts (-79.9/contact) +
2D Compatibility (PS) -24224 + (NN) -13713 + (LL) 1476
1D Compatibility (HY) -19600 + (ID) 4650
Total energy: -201240.0 ( -114.47 by residue)
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_4YMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMU-query.scw
PDB file : Tito_Scwrl_4YMU.pdb: