Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCVDYNVNTESLFKLVNQENQKEKAKIKEFIRYFYNFVYNSDLKINDKFLLYVVEDAYNFIFKKEKEESKLMVSNVNDIPGIEGDFTTIKIINNDMPFLVDSVIATIKSHDLTICYYSNSVINIQRKSGLINEICNLEENNGTKESVIYVIIKGISNSFVDTLRKSLQKTLKAVNYVVKDWPLMLKRLDEAKDLLSIAQAVDTEIQPAPYTGMISGRDFLVWLKNNNFVFLGYQERIADKDGKLVPNDEENLGLMKASREYQNSSISSKGLYPLYILRSDLTSIVHRRTYMNCIGVKESNKQGDVVKERHFFGLFTSVAEVQDIRTIPLIKDKVKTIEKRAGFLPGGHNNKALISILQAFSCGELFQSNEDELFKVCISIMSLAIRPRVKLFLRKVGDFISCIVLIPMRYASARLMFKIRDILKDEINAASSDIYNNHIINEYDLMKLHVVLKVKDARVFDDEVLCIENKLRNITEKWEDRFIDNLYNTLSTVEDIFILYCKAFPISYQESFEPHDAYYDMKKLEIVRKKGASEVDLRLTRDNLNYQLKVYTPGNGGLELSKILRITKNLGAKILSHNGYYIEINGGIWIHHFVLSRVDKLIDNITLKEQFEITLAKVFRMEIKNDHFNSLIIIAGLEWKEVLLVRALSAYLKQMSFNYNPEYIQKVVSEYPKIVKYLIQLFHVRFDPSIDIDRAETTDIFREKIEELLKEISNVSHDYVLRSIFNLIMAILRTSYYQDDKPRLSIKFDSSKINGLPDPRPYRELYV---YS----NLFEGIHLRGGK---LARGGLRWSDRTEDFRTEVLGLMKAQMTKNA--VIVPVGAKGGFVIKKVYRDKDILREKGVECYRDFIRGMLAITDNIVDGKIIPPENVVRYDEDDPYLVVAADKGTAS--FSDYANQIAHEYNFWLGDAFASGGSA--GYDHKKMGITARGAWIAAQRHFWKMNKDIYQNVAVVGIGDMAGDLFGNGMLLS--KNIRLIGAFNHMHIFVDPNPSAEKSFAERKRLFELPFSTWMDYNKDLISQGGGVFERSSKQVNVSQEMKKCFDIMEDTLSPSDLIRYLLKAKVDFIWNGGIGTFVKARSESHDMVGDKANDELRVNGENIRASMFIEGGNLGCTQLGRIEYAERGGYINADFVDNSAGVICSDLEVNIKIAFVSVMKGGSISLEKRNEILASMVDEVASKVLEDHNRIETKALLFECLQAKERLEQHHRLLLSLEKSGLLNRSVEFLPTDEEIARMLTGAGGFSSPQLSVLMSYSRTAIKNEIIHSDLPEKDFLCHDYLLNYFPQKMVTEFKDFILKHQLRREIISTCIVNDVVNRMGCIFINNLVESTGIKVYEAVNVYIVVNHLYGLNSLWQEIDKLDGKINIDSYLQIVRNVQKFIGRVSFWLVKNLGKLSFVELDDVTKFKDAIETLGQNLTDVLDEHLLKTYNHGSSFLVELNINKDLARKVADLCVLAYALDVISIAEQTSLSILDAGKIYFELKSLLRFDLIRTIAIKIKSYSSYWDRSLINDLLDDLSNYHYKLAVKVIRATDNYENKVQTWACNDKDYIERYNSFLDEMIASKLDLSKLIFIIRRIKVLAL |
| 3K92 Chain:A ((33-422)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GYPGDMYELMKEPQRMLTVRIPVKMDNGSVKVFTGYRSQHNDAVGPTKGGVRFHPEV--NEEKVKALSIWMTLKCGIANLPYGGGKGGIICDPRTMS----FGELERLSRGYVRAISQIVGPTK------------------D-IPAPDVYTNSQIMAWMMDEYSRLREFD-SPGFITGKPLVLGGSQGRETATAQGVTICIEEAVKKKGIKLQNA-RIIIQG--FGNAGSFLAKFMHDAGAKVIGISDANGGLYNPDGL---DIPYLLDKRD-SFGMVTNLFT-------------------------------DVITN----EELLEKDCDILVPAAISNQI-----TAK------------NAHNIQASIVVERANGPTTIDATKILNERGVLLVPDILASAGGVTVSYFEWV-----QNN-QGYYWSEEEVAEKLRSVMVSSFETIYQ-TAATHK--VD---MRLAAYMTGIRKSAEASRFRGWV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120443 for 3293 contacts (-36.6/contact) +
2D Compatibility (PS) -39894 + (NN) -15890 + (LL) 92860
1D Compatibility (HY) -6400 + (ID) 3150
Total energy: -92917.0 ( -28.22 by residue)
QMean score : 0.362
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