Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFSIGLSEILVVVLVSIIVLDKNKVPVFIDLIKNIYRYLTIIKSKARRLLKDAGIEELYKEYNTEKVNYIIGKDGKLYPTYNIDNTPKDNDSEDSSSRRRAI-----
1MNM Chain:A ((15-99))
--------------------QKERRKIEIKFIENKTRRHVTFSKRKHGIMKKA--FELSVLTGTQVLLLVVSETGLVYTFSTPKFEPIVTQQEGRNLIQACLNAPDD
General information:
TITO was launched using:
RESULT:
Template:
1MNM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 6246 for 416 contacts (15.0/contact) +
2D Compatibility (PS) -8965 + (NN) -4853 + (LL) 2700
1D Compatibility (HY) -1600 + (ID) 700
Total energy: -7172.0 ( -17.24 by residue)
QMean score : 0.383
(partial model without unconserved sides chains):
PDB file :
Tito_1MNM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1MNM-query.scw
PDB file :
Tito_Scwrl_1MNM.pdb
: