Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEARNLILAAILSILIIVSWRIIYDNFLNAEQDHPLIENIEHIESFNDLAPVIHQSRSEIINSTREQRINLTNNMVKGSISLKGARFDDLILTNYCLEPDPSSPQVVLLSPAESKDVYFAEFGWLDPNGKTKVPDSKTFWQAEKTELTNQKAVNLFWNNENGIVFRMKVSLDNNYMFKVEQIVENNTKDNVVLVPYGKINRKRDNINESYWISHEGILGAFDNKLEEWTYKNVAKKHLIKASTSKKNWFGFADKYWLTAIIPEKFDKTNVSIKHTNANNVDKFQVDFVKPYKNILPGTSASNVNYFFAGAKKLNLLDYYKSTLNIPLFDKAVDFGVLYFITKPVFLLLEYFNFVLKNFGLAILLLTLVIKLLMLPLSNRSYVSMFKMKSLQPEVARIKELYKNDSLKQHKETIALFKKNNVNPMSSILPILVQIPVFFALYKVLFVTIEMRHAPFCLWIKDLSTSDPTNIFTLFGLFNYNFPISIGILPIILGITMIIQQKIGEKGQTNKDDIQANVMKFFPYISIFIFSSFPAGLVIYWIFSNVITLIQQSLIKLFLTRKLGINVENTNS |
| 4UTQ Chain:A ((419-531)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLGGCFPLLIQMPIFLALYYMY------------------------------------------ILPILMGVTMFFIQKI---------------MTFMPVIFTVFFLWFPSGLVLYYIVSNLVTIIQQQLIY---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UTQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55828 for 434 contacts (-128.6/contact) +
2D Compatibility (PS) -7376 + (NN) 4464 + (LL) 34112
1D Compatibility (HY) -18000 + (ID) 100
Total energy: -42728.0 ( -98.45 by residue)
QMean score : -0.040
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