Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKILIVNSIYYTEIANLLLEGATDKLKGSNASYNVIEVPGAFEIPAAILFAVKSKH---FNYDGYLALGCVIRGETDHYQYICKGVIKGLNEVVMHNTVPLGMGVITADSKDKALVRADKDKKNIGGRTASAVLHMIDLYNKLR
2O6H Chain:D ((15-155))
---LLIVEARFYDDLADALLDGAKAALDEAGATYDVVTVPGALEIPATISFALDGADNGGTEYDGFVALGTVIRGETYHFDIVSNESCRALTDLSVEESIAIGNGILTVENEEQAWVRARREDKDKGGFAARAALTMIGLRKKFG
General information:
TITO was launched using:
RESULT:
Template:
2O6H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124799 for 1142 contacts (-109.3/contact) +
2D Compatibility (PS) -14981 + (NN) -9129 + (LL) 244
1D Compatibility (HY) -12400 + (ID) 2750
Total energy: -163815.0 ( -143.45 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_2O6H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O6H-query.scw
PDB file :
Tito_Scwrl_2O6H.pdb
: