Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKDEKSKTLFEVEGAVTALLPAAEFRVKLDNEHEIICHVSGKVRRSKIRIIIGDRVLVEMSIYDRNAKKGRIIRRLKGTSDRTISK
4QL5 Chain:A ((6-73))
----D----VIEVEGKVVDTMPNAMFTVELENGHQILATVSGKIRKNYIRILAGDRVTVEMSPYD--LTRGRITYRFK---------
General information:
TITO was launched using:
RESULT:
Template:
4QL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44922 for 446 contacts (-100.7/contact) +
2D Compatibility (PS) -7297 + (NN) 1116 + (LL) 728
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -58175.0 ( -130.44 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_4QL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QL5-query.scw
PDB file :
Tito_Scwrl_4QL5.pdb
: