Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDIIKFVLLLPTILLILTAGVYLSVRLKWLQIFRLPHALSLIGVKKGENKFSSIAALFTILGGNLGVGNISGTAVALKTGGPGSILWMAIIVIITSVIKYVTCYLSIKNRKKKNGRFIGGPMAYMVDAFNSRKATVVFLVIMIMVSIIVGNLVQVNSLSIPLDMIN--VP-VV---TGGIIMTIIFFVVAALSLKKIKIFISAMIPIMTISYLTLCGIIL-FKFSENILPSLKLITSSFFTTSSFNFGLSLGLVLEMLTIIQVGTLRGIFATDIGLGLEGIVHSSIIPKKNNNKFIIEQSLI-TIISPFIV-AFIVFITTMVLLVTDSWV-TGLESTNMCIFAFRKAMNWPYIDYLIMAIMFCFAFTTIFTWFFCSKQTIRYVSQNDKYTKIWIIIFTAVIPLGSISKVQLLWDVADISIAALLFINILAILKLTSRDPEVFTVSSRYLKLNQPIFNKNKTRNWLAILILRG |
| 3L1L Chain:A ((7-307)) | -----------------------------------------------AHKVGLIPVTLMVSGAIMGSGVFLLPANLASTG-GIAIYGWLVTIIGALGLSMVYAKMSFLDPSP------GGSYAYARRCFG-PFLGYQTNVLYWL-ACWIGNIAMVVIGVGYLSYFFPILKDPWVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA---AIQSTLNVTLWSF---IGVES------------------------ASVAA--GV-----VKNPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFG--DAARMALGD-TAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILMTIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTTI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L1L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291284 for 2445 contacts (-119.1/contact) +
2D Compatibility (PS) -28090 + (NN) 850 + (LL) 7476
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -319748.0 ( -130.78 by residue)
QMean score : 0.210
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