Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------MNNGSIALSSILSAITDTILGTLKNTAVNT-PNVKSTGYNILPNTA---SKVVPVVITVIIDPPIL------------------------------------------------------------------------------------------------ |
| 4K92 Chain:A ((17-259)) | AVDEEDFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLG----NKFDHGAEAIMPTI----FNLIPNSAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K92.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35141 for 352 contacts (-99.8/contact) +
2D Compatibility (PS) -5127 + (NN) -28 + (LL) 272
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -44624.0 ( -126.77 by residue)
QMean score : 0.503
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