Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQAKAENGVVLLGSTGESLSLTDSEKRTLVEFACKLKLN-MKIIIGVPGVNLYQTLEWLNFCKDIPIHGYLMTTPIYTKPGVMGQTLWFEKLLEKAHVPAMFYNIPSRAGVSLHVETVYNLS-SHERFWAIKDSSGTVDTLIEYKKV-APNVEVFCGDDNMIHDMAAYGTAGLVSVASNAWPHVAHEYVKQCLNGK----SFHADVWQQACKALFIASNPIPTKALLHGIGLIEHRTVRLPLSTQDLPSVDEIKKATEIILNLEKVNYFYHPMV |
| 2VC6 Chain:A ((30-290)) | QIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPNVKGV-DATGNLLRPSLERMACGEDFNLLTGEDGTALGYMAHGGHGCISVTANVAPALCADFQQACLNGDFAAALKLQDRLMPLHRALFLETNPAGAKYALQRLGRMRG-DLRLPLVTISPSFQEEIDDAMRHAGILL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -161381 for 2122 contacts (-76.1/contact) +
2D Compatibility (PS) -26913 + (NN) -10293 + (LL) 840
1D Compatibility (HY) -5600 + (ID) 3250
Total energy: -206597.0 ( -97.36 by residue)
QMean score : 0.459
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