Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVITIASAVAEVERMSILLSQVKHETLLTMQVLNEHKSLSRSLVEKLNKKEDDNLSTKDISIYMTHLLLEHYNVKMHCICENNLLE--IGLTLT
1RO8 Chain:A ((192-227))
--------------------------------------------------------SKNTDIKALEFLEKTYKIKLYCLCPNSLLANFIGLAPN
General information:
TITO was launched using:
RESULT:
Template:
1RO8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13577 for 150 contacts (-90.5/contact) +
2D Compatibility (PS) -3619 + (NN) 404 + (LL) 5444
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -15598.0 ( -103.99 by residue)
QMean score : 0.256
(partial model without unconserved sides chains):
PDB file :
Tito_1RO8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RO8-query.scw
PDB file :
Tito_Scwrl_1RO8.pdb
: