Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLPDKIIYEGKAKFIIETKDPLTVIQYFKDEVTAFNKEKYKIIEGKGTINNRISTFIMETLEKAGINTHFIKTLSEREQLVKKLKIIPLEIVVRNIAAGSFCKRFNIKEGEKLAFPIIEFFYKNDGLADPMVNENHVLYFGWLSYEEMEEIKTITIKINTVLIDLFLNAGIDLVDLKLEFGRPINDNTKITLADEISPDNCRLWDKNTHKKLDKDVFRLNLGNLKEAYLEVAKRLSVKLC |
| 2YZL Chain:A ((8-241)) | ILKKQPLYSGKAKSIYEIDDDKVLIE-FRDDITAG-GAKHDVKQGKGYLNALISSKLFEALEENGVKTHYIKYIEPRYMIAKKVEIIPIEVIVRNIAAGSLCRRYPFEEGKELPFPIVQFDYKNDEYGDPMLNEDIAVALGLATREELNKIKEIALKVNEVLKKLFDEKGIILVDFKIEIGKDREGN--LLVADEISPDTMRLWDKETRDVLDKDVFRKDLGDVIAKYRIVAERLGLL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95461 for 1854 contacts (-51.5/contact) +
2D Compatibility (PS) -24783 + (NN) -3689 + (LL) 368
1D Compatibility (HY) -22800 + (ID) 5500
Total energy: -151865.0 ( -81.91 by residue)
QMean score : 0.437
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