Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIKRVVIFGGTGFIGKHIVRRLATAGYLIRVFVRNQEKAACLKLCGNLGQISIFKGDFFDEKLILESVEECN--VVINLVGILYEVK----EHSFYAVHVGIAEKIARAAKIKNVSMMIHFSAMGI-------------ENSKLSEYAQSKLKGEKAVTAAFPEAIIIKPSLVFGKE-DNFFTKFARLATILPFLPLIGSGTTKFQPICVTDLAEMVYRIINLNKQDKK---IYNIGGPKIYSFKSLLKFILNVTNRKCLLVNVSFPMAKLIAFFLESRIISILLKPITGDISPMLTRDQVRVMMSSSIEKSTDFEAIKIRPLSIENVVPEYLKVYKKY-- |
| 1N2S Chain:A ((1-298)) | --MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCG----------------DFSNPKGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYG--APTGAELLADCTAHAIRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALT------------------ELNAVPTSAYPT----PASRPGNSRLNTEKFQRNFDLILPQWELGVKRMLTEMFTTTT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203178 for 2298 contacts (-88.4/contact) +
2D Compatibility (PS) -29812 + (NN) -12036 + (LL) 3768
1D Compatibility (HY) -7600 + (ID) 2950
Total energy: -251808.0 ( -109.58 by residue)
QMean score : 0.427
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