Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIGQVLSNDDWNRYKKEGFLVTKFGSLIDYVINWARSGSLWPMTFGLACCAVEMMHTASSRYDLDRYGIMFRASPRQADVMIVAGTLTNKMAAALRKVYDQMADPKYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGMLCLQNKIKRTQNI
2FUG Chain:O ((15-159))
--------------EREGILFTT----LEKLVAWGRSNSLWPATFGLACCAIEMMASTDA----------------QADVMIVAGRLSKKMAPVMRRVWEQMPDPKWVISMGACASSGGMFN-NYAIVQNVDSVVPVDVYVPGCPPRPEALIYAVMQLQKKVRGQAYN
General information:
TITO was launched using:
RESULT:
Template:
2FUG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109358 for 939 contacts (-116.5/contact) +
2D Compatibility (PS) -13791 + (NN) -9711 + (LL) 1892
1D Compatibility (HY) -19200 + (ID) 3550
Total energy: -153718.0 ( -163.70 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_2FUG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FUG-query.scw
PDB file :
Tito_Scwrl_2FUG.pdb
: