Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDKMYEECGVFGISCNKDSAFDSILGLHALQHRGQESFGVVT-SNNDKLHSYHFQGQVSSVLDNIDEIKKSLPGNYAIGHVRYSTSGNKSGVQPILGKSNKFGDFAIAHNGNLINISPIREQLIKQGRVFQSDIDTEVVARLVEANT--KNSFLGSFIYALKQIQGAYSFVAI--NREVVVGVRDSAGIRPLVLGKLNSS--YVLASETCALDIVNAEFIREIEPGELVTIDQNGNLASAF---PLSQQKSSFCIFEYIYFSRPDSIIEDRSIYDIRKEIGRTLAEESPPKN-NVDMVVPIPDSGIPAAIGYTKYSGLPIELGIIRNHYIGRTFIQP--TAEVRKVRIKLKFNANKDILKGKNIILIDDSIVRGSTLKSIIVMLKDAGVKEIHLKISSPPIKYSCFYGIDTPECKDLIAASKSVREIEAIIGVNSLTFLSIDGLYQAVNGEKRNNTAPQYCDACFTGDYPIGK----------- |
| 1AO0 Chain:A ((1-459)) | --------CGVFGIWGHEEAPQITYYGLHSLQHRGQEGAGIVATDG-EKLTAHKGQGLITEVFQNGE--LSKVKGKGAIGHVRYATG--YENVQPLLFRSQNNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEVLAHLIKRSGHF--TLKDQIKNSLSMLKGAYAFLIMTET--EMIVALDPNGLRPLSIGMMG--DAYVVASETCAFDVVGATYLREVEPGEMLIINDE-GMKSERFSM---NINRSICSMEYIYFSRPDSNIDGINVHSARKNLGKMLAQESA---VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFI--QPSQALREQGVRMKLSAVRGVVEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISSPPIAHPCFYGIDTSTHEELIASSHSVEEIRQEIGADTLSFLSVEGLLKGIGRKYDDSN-CGQCLACFTGKYPTE-IYQDTVLPHVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -335080 for 3940 contacts (-85.0/contact) +
2D Compatibility (PS) -46155 + (NN) -16530 + (LL) 856
1D Compatibility (HY) -36800 + (ID) 9550
Total energy: -443259.0 ( -112.50 by residue)
QMean score : 0.481
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