Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MKRESDQCNEESNRQST--THIHVYNRSLDFLGYLLLRYCIDSLLVRCGHTIVIYGNTTNQSRENKKKDSEDSRKLLALGIVAAVVCVGFPC
2JVU Chain:A ((1-98))
GGSGWNADNVDPSQCIKQSGVQYTYNSGVSVCMQGLNE-GKVRGVSVSGVFYYNDGTTSNFKGVVTPSTPVNTNQDINKTNKVGVQKYRALTEWVGSRS
General information:
TITO was launched using:
RESULT:
Template:
2JVU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8473 for 539 contacts (-15.7/contact) +
2D Compatibility (PS) -9389 + (NN) 224 + (LL) 176
1D Compatibility (HY) 1200 + (ID) 900
Total energy: -17162.0 ( -31.84 by residue)
QMean score : 0.221
(partial model without unconserved sides chains):
PDB file :
Tito_2JVU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JVU-query.scw
PDB file :
Tito_Scwrl_2JVU.pdb
: