Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MITLNNLNC--CTKFGIELEFYTEGIER------------------------------------------------EHLFLNSVKNKIALLGF---SCKKESS-THQYEIKSGCYNDSNNLIKHFDLAKELLTETAQKLGGNTSFKAKPYLDRAGSALNVHVNLVDSNNSNLFYCNE-QKYSDYLIYGIGGLCAMMKEHMSFFAPSDDSYLRFQYPDIHTPTTISWGVNNRTAAIRIPCLG--SKCRLEHRVPGADCNLEKVLIAIIEGITFGIENKIAPPNRVYGIASDPQYKMENLV |
| 1F52 Chain:A ((115-399)) | ---LRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVAIDDIEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFN-TMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAKN-GTNLFSGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPG-YEAPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEPMDKNLYDLPPEEAKEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F52.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117668 for 1862 contacts (-63.2/contact) +
2D Compatibility (PS) -24170 + (NN) -10213 + (LL) 228
1D Compatibility (HY) -7200 + (ID) 2750
Total energy: -161773.0 ( -86.88 by residue)
QMean score : 0.401
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