Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLINPKVSAMFFDQIVTATDHNIAWEKIQNLLYNLYGEATYNSWLSSLKFVSSSNGEVLLSVPTRFIKEWITVHYMEKILLLWQNEDKSICSIDIQVTEEKNSSSSIISKNKEESVNNLGSPLDPRFTFDNFVVGKPNELAFTAAKRVAESIDPIPGSNPLFLYGGVGLGKTHLMHAIAWHIVNSPSAKRKVVYLSAEKFMYQY-ITALRSKDIMLFKEQ-FRSVDVLMVDDVQFISGKDSTQEEFFHTFNALIDQNKQLVISADRSPSDLDGVEERIKSRLGWGLVADINETTFELRLGILQAKVEQMNMYVPQDVLEFLARNIRSNIRELEGALNKVAHTSLIGRSMTVESASETLMDLLRSNHRSITIA-EIQKKIAEFFNIKVTDMHSNRRLRSLVRPRQIAMYFAKKFTHKSLPDIGRSFGGRDHATVIHAVKQIENFIKTDSEFADEINQLRKMFK---- |
| 1L8Q Chain:A ((2-324)) | -------------------------------------------------------------------------------------------------------------------------DFLNPKYTLENFIVGEGNRLAYEVVKEALEN--LGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKR---GYRVIYSSADDFAQ-AMVEHLKKGTINEFR-NMYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEKQIILASDRHPQKLDGVSDRLVSRFEGGILVEI-ELDNKTRFKIIKEKLKEFNLELRKEVIDYLLENT-KNVREIEGKIKLIKLKG--------------FEGLERKERKERDKLMQIVEFVANYYAVKVEDILSDKRNKRTSEARKIAMYLCRKVCSASLIEIARAFKRKDHTTVIHAIRSVEE--EKKRKFKHLVGFLEKQAFDKIC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L8Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200152 for 2401 contacts (-83.4/contact) +
2D Compatibility (PS) -35259 + (NN) -25100 + (LL) 10776
1D Compatibility (HY) -23600 + (ID) 5600
Total energy: -278935.0 ( -116.17 by residue)
QMean score : 0.603
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