Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSNYL----LVAAAE--------------------TLEKDLFNQYGLIS--GKIYVILPSSK---VTCISQNVEHSSKRLLIN------NFDELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYALVVD-VNFKDEY------EMRGWCEKSDVIALDVLFINNFQQNQD--IYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGN-PGKNSEP---LVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDMQRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
4I14 Chain:A ((5-383)) | --------DSVERAVADIAAGKAVIVIDDEDRENEGDLIFAAEKATPEMVAFMVRYTSGYLCVPLDGAICDRLGLLPMY--AYTVTVDARNGIGTGISASDRATTMRLLADPTSVADDFTRPGHVVPLRAKD--GGVLRRPGHTEAAVDLARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALITIADLIEWRRKHEKHIERVAEARIPTRHGE-FRAIGYTSIYEDVEHVALVRGEIAG---DGDDVLVRVHSECLTGDVFGSRRCDCGPQLDAALAMVAREGRGVVLYMR----------------------------------------YGIGAQILVDLGVRSMRLLTNNP------DGYGLHIIERVPLP------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4I14.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181291 for 1980 contacts (-91.6/contact) +
2D Compatibility (PS) -29972 + (NN) -13017 + (LL) 4528
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -241752.0 ( -122.10 by residue)
QMean score : 0.443
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