Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNMYRVLLVLALLTSSNLNALINYSKPISVDSRIKTFVYSPNEVFTVIFSQGYYSYIEFAEGEKVKNIAVGDASSWRISPYDNKLLIMPFEVSSRTNMIITTTKKRNYIFDLISRPNYDKYPDTDAEKVSHDYSAEKDISYVVRFYYPKEEDEFDIDLDEISAPTQMQYVVDRPEKIIQENDTKYNYTYIDEGGNADMIPIELFDDGYLTYFKFRDS----NKIPQIFA--KDGKTRLPCKRLLFDGYVIIKGVHKKLFMRYENDEVEIINRSL- |
2N01 Chain:B ((1-106)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSHMNAKILKDRRYYYDYDYATRTKKSWLIPSRVYDDGKFTYINMDLTRFPTGNFPAVFAREKEHAEDFLVNTTVEGNTLIVHGTYPFLVVRHGDNVVGLRRNKQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2N01.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35743 for 630 contacts (-56.7/contact) +
2D Compatibility (PS) -10494 + (NN) -2412 + (LL) 11576
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -44123.0 ( -70.04 by residue)
QMean score : 0.465
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