Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRYTGGDKREKQCFSSVDSNYNHTIKRQNFEIMKTIGTLIQEGSKLLSSHKVESPYLDCEIIMQHVLDVERSFIIMNYADQVSIKKEQLFWKLTKKRAERYPISQIIGNREFWSKNFIVNRHVLDPRADSEILVSAALKYYPNKKQEMEIADFGTGTGCLLISVLSEYEHAVGVGFEKSLKAYKVACQNMEKHNLLGRAKMFPSSWTEC--KGLFDLIISNPPYIRRDKLKDLQAEVQKEPKIALDGGIDGLSCYLSIFPILKRCLKKNGFAILEIGEDQN-DIDKIVPSYEL-AFQEYMYDLAGMKRCIVIKRT |
2B3T Chain:A ((1-275)) | ---------------------------------MEYQHWLREAISQLQA--SESPRRDAEILLEHVTGRGRTFILAFGETQLTDEQCQQLDALLTRRRDGEPIAHLTGVREFWSLPLFVSPATLIPRPDTECLVEQALARLPE--QPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAI-KNIHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHD-VETCRDYGDNERVTLGRYY |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127288 for 2266 contacts (-56.2/contact) +
2D Compatibility (PS) -28450 + (NN) -6400 + (LL) 2332
1D Compatibility (HY) -9200 + (ID) 3850
Total energy: -172856.0 ( -76.28 by residue)
QMean score : 0.455
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