Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYRIVSSNILKYKNCEPKIDESAFIAGDSHIVGKVEIGREASIWFNCVIRGDIGSIKIGDGTNIQDGTVIHVDRNPGGDTIIGDMVTVGHFCMLHACTVHDKALIGMGSIVMDHAIVESEAMVAAGSLVTHRKVIKSGEMWAGRPAKFFKKISDEEVKYITQSAQNYIMLMKKYKN
3IXC Chain:A ((26-190))
--------LVPYAGVSPSVDSTAFIAGNARIIGDVCIGKNASIWYGTVLRGDVDKIEVGEGTNIQDNTVVHT-----GDTVIGKFVTIGHSCILHACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKSGELWAGRPAKFLRMMTEEEILYLQKSAENYIALSRGYL-
General information:
TITO was launched using:
RESULT:
Template:
3IXC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -155066 for 1389 contacts (-111.6/contact) +
2D Compatibility (PS) -17676 + (NN) -2490 + (LL) 356
1D Compatibility (HY) -21200 + (ID) 4400
Total energy: -200476.0 ( -144.33 by residue)
QMean score : 0.532
(partial model without unconserved sides chains):
PDB file :
Tito_3IXC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IXC-query.scw
PDB file :
Tito_Scwrl_3IXC.pdb
: