Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKHKIKKRKLSRCTEHRLSMLKNLSISLINHEQIITTLPKAKELRPYVEKFITIAKNKNTLHGRRLLLSRLHNNKLVVDKLLNVLASRYQGCKGGYSRVMKFSTRKGDCASMAVIELVNRDVTAKGKVCDKNKEKNEVATKS
4UY8 Chain:N ((1-118))
MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKT-DSVANRRLAFARTRDNEIVA-KLFNELGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRSE--------------------
General information:
TITO was launched using:
RESULT:
Template:
4UY8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57591 for 803 contacts (-71.7/contact) +
2D Compatibility (PS) -12662 + (NN) -3779 + (LL) 1056
1D Compatibility (HY) -8800 + (ID) 2850
Total energy: -84626.0 ( -105.39 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_4UY8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4UY8-query.scw
PDB file :
Tito_Scwrl_4UY8.pdb
: